Search results for "joint species distribution models"

showing 7 items of 7 documents

Habitat area and local habitat conditions outweigh fragmentation effects on insect communities in vineyards

2022

Fragmentation of habitat, for example by intensive agricultural practices, can be detrimental to local biodiversity. However, it often remains unclear whether such biodiversity declines are caused by loss of habitat area or increased fragmentation, and how habitat quality factors into it. In our study system, vegetated vineyards are typically small, and isolated from one another, potentially limiting the distribution and dispersal of organisms. In a full-factorial experiment of a priori selected vegetated vineyard patches of differing size and fragmentation, we aimed to disentangle the effects of habitat area (area of vegetated vineyards), habitat fragmentation (number of vegetated vineyard…

wildbeeskaskaatviininviljelypintakasvillisuus590Agriculturewild beesvineyardsground vegetationmaatalousmehiläishoitojoint species distribution modelsHierarchical Model of Species Communities HMSC1181 Ecology evolutionary biologyyhdyskunnatGeneral Earth and Planetary Sciencesmaakiitäjäisethierarchical model of species communities(HMSC)leafhoppersHierarchical Model of Species Communities (HMSC)jointspeciesdistributionmodelsmehiläispesätground beetlesGeneral Environmental Scienceagriculture
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Choosy beetles : How host trees and southern boreal forest naturalness may determine dead wood beetle communities

2021

Wood-living beetles make up a large proportion of forest biodiversity and contribute to important ecosystem services, including decomposition. Beetle communities in managed southern boreal forests are less species rich than in natural and near-natural forest stands. In addition, many beetle species rely primarily on specific tree species. Yet, the associations between individual beetle species, forest management category, and tree species are seldom quantified, even for red-listed beetles. We compiled a beetle capture dataset from flight intercept traps placed on Norway spruce (Picea abies), oak (Quercus sp.), and Eurasian aspen (Populus tremulae) trees in 413 sites in mature managed forest…

0106 biological sciencestalousmetsätSpecies distributionForest managementEndangered speciesluonnonmetsätNear-natural forestManagement Monitoring Policy and Law010603 evolutionary biology01 natural sciencesjoint species distribution models (JSDMs)Ecosystem servicesindicator speciesuhanalaiset eläimetnear-natural forestRed-listed speciessaproxylic beetleslahopuutNature and Landscape ConservationkovakuoriaisetbiologyEcologyEcologyForest ScienceTaigaSaproxylic beetlesForestryPicea abieseliöyhteisöt15. Life on landJoint species distribution models (JSDMs)biology.organism_classificationbiodiversiteettiColeopterametsäekosysteemitGeographyHabitatIndicator speciesIndicator species1181 Ecology evolutionary biologyred-listed speciesindikaattorilajit010606 plant biology & botany
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Does trait-based joint species distribution modelling reveal the signature of competition in stream macroinvertebrate communities?

2021

1. The occupancy and abundance of species are jointly driven by local factors, such as environmental characteristics and biotic interactions, and regional‐scale factors, such as dispersal and climate. Recently, it has been shown that biotic interactions shape species occupancies and abundances beyond local extents. However, for small ectothermic animals, particularly for those occurring in freshwater environments, the importance of biotic interactions remains understudied. Species‐to‐species associations from joint species distribution models (i.e. species associations while controlling for environmental characteristics) are increasingly used to draw hypotheses of which species possibly sho…

0106 biological sciencesMetacommunitymedia_common.quotation_subjectSpecies distributionpurotfunctional feeding guildsBiology010603 evolutionary biology01 natural sciencesCompetition (biology)Riversjoint species distribution modelsAbundance (ecology)substrate attachment modedistributionAnimalsdispersalEcosystemFinlandEcology Evolution Behavior and Systematicsmedia_commonEcology010604 marine biology & hydrobiologyinterspecific competitionvesiekosysteemitlevinneisyysInterspecific competitioneliöyhteisöt15. Life on landselkärangattomatstreamsInvertebratesEnvironmental niche modellingPhenotypeHabitat1181 Ecology evolutionary biologyBiological dispersalAnimal Science and Zoologybody sizeleviäminen
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Traits mediate niches and co‐occurrences of forest beetles in ways that differ among bioclimatic regions

2021

Aim The aim of this study was to investigate the role of traits in beetle community assembly and test for consistency in these effects among several bioclimatic regions. We asked (1) whether traits predicted species’ responses to environmental gradients (i.e. their niches), (2) whether these same traits could predict co-occurrence patterns and (3) how consistent were niches and the role of traits among study regions. Location Boreal forests in Norway and Finland, temperate forests in Germany. Taxon Wood-living (saproxylic) beetles. Methods We compiled capture records of 468 wood-living beetle species from the three regions, along with nine morphological and ecological species traits. Eight …

0106 biological sciencesBayesian joint species distribution models (JSDMs)Species distributionMODELSDead woodClimate changeUNCERTAINTYphylogeny010603 evolutionary biology01 natural sciencesPhylogeneticsSPECIES DISTRIBUTIONDISTRIBUTIONSsaproxylic beetlesenvironmental gradientsEcology Evolution Behavior and SystematicsEcological nichekovakuoriaisetSAPROXYLIC BEETLESfylogeniaEcologyEcology010604 marine biology & hydrobiologybayesilainen menetelmäBIOTIC INTERACTIONSBayesian joint species distribution models (JSDMs); climate change; Coleoptera; ecological traits; environmental gradients; HMSC; morphological traits; phylogeny; saproxylic beetles; species associations15. Life on landilmastonmuutoksetecological traitsspecies associationsHMSCekologinen lokeroColeopteraGeographyclimate changeFUNCTIONAL TRAITS1181 Ecology evolutionary biologymorphological traitsPATTERNSDEAD-WOODympäristönmuutoksetRESPONSES
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Species co-occurrence networks of ground beetles in managed grasslands

2020

AbstractGrassland biodiversity, including traditional rural biotopes maintained by traditional agricultural practices, has become threatened worldwide. Road verges have been suggested to be complementary or compensatory habitats for species inhabiting grasslands. Species co-occurrence patterns linked with species traits can be used to separate between the different mechanisms (stochasticity, environmental filtering, biotic interactions) behind community structure. Here, we study species co-occurrence networks and underlying mechanisms of ground beetle species (Carabidae) in three different managed grassland types (meadows, pastures, road verges, n = 12 in each type) in Central Finland. We a…

0106 biological scienceslaitumetesiintyvyysBiodiversitytienpientareetkedotnurmet010603 evolutionary biology01 natural sciencesGrasslandGround beetlejoint species distribution modelsspecies traitsmaakiitäjäisetEcology Evolution Behavior and Systematicsbiodiversitygeography.geographical_feature_categoryEcologybiologyEcology010604 marine biology & hydrobiologyCommunity structureenvironmental filteringeliöyhteisötbiology.organism_classificationbiodiversiteettiGeographyHabitatAnimal ecologyThreatened speciesSpecies richnessCarabidae
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The relationships between urbanization and bird functional traits across the streetscape

2023

Publisher Copyright: © 2023 The Authors The urbanization process leads to changes in bird communities’ taxonomic and functional compositions. Highly urbanized areas generally exhibit a reduced number of bird species sharing few functional traits. However, most urban bird studies focused on vegetation patches in temperate cities. In this study, we investigate how urban environmental attributes – noise, height of buildings, and urban vegetation characteristics – modulate species occurrences and the distribution of functional traits across the streetscape of a tropical metropolis. We predicted diverse trait-environment relationships, but that highly urbanized contexts (e.g., noisy streets with…

vuorovaikutusEcologykaupungitympäristörakennettu ympäristöurban landscapekaupunkiympäristöManagement Monitoring Policy and LawJoint Species Distribution ModelsUrban Studiesbird morphological and life-history traitsjoint species distribution models1181 Ecology evolutionary biologylinnutlajitkaupungistuminenneotropical cityBird morphological and life-history traitsUrban landscapeNature and Landscape ConservationNeotropical city
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Data from: Choosy beetles: how host trees and southern boreal forest naturalness may determine dead wood beetle communities

2021

See methods section of paper for detailed information on dataset and sources; briefly, these .csv files includes numbers of each beetle species captured at all sites used in the project, as well as information about each site and about each species. Data from: Choosy beetles: how host trees and southern boreal forest naturalness may determine dead wood beetle communities Ryan C. Burner, Tone Birkemoe, Jörg G. Stephan, Lukas Drag, Jörg Muller, Otso Ovakainen, Mária Potterf, Olav Skarpaas, Tord Snall, Anne Sverdrup-Thygeson Forest Ecology and Management, 2021 From abstract of paper: Wood-living beetles make up a large proportion of forest biodiversity, and contribute to important ecosystem se…

boreal forest coleoptera indicator species joint species distribution models (JSDMs) near-natural forest Norway red-listed species saproxylic beetles
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